Publications

Recent publications by our members

Quantitative Chemical Imaging of Nonplanar Microfluidics
Matthew K. Gelber, Matthew R. Kole, Namjung Kim, Narayana R. Aluru and Rohit Bhargava
Analytical Chemistry 89(3) (2017) 1716–1723
doi:10.1021/acs.analchem.6b03943
Integration of new biological and physical retrospective dosimetry methods into EU emergency response plans – joint RENEB and EURADOS inter-laboratory comparisons
Elizabeth Ainsbury, Christophe Badie, Stephen Barnard, Grainne Manning, Jayne Moquet, Michael Abend, Ana Catarina Antunes, Lleonard Barrios, Celine Bassinet, Christina Beinke, Emanuela Bortolin, Lily Bossin, Clare Bricknell, Kamil Brzoska, Iwona Buraczewska, Carlos Huertas Castaño, Zina Čemusová, Maria Christiansson, Santiago Mateos Cordero, Guillaume Cosler, Sara Della Monaca, François Desangles, Michael Discher, Inmaculada Dominguez, Sven Doucha-Senf, Jon Eakins, Paola Fattibene, Silvia Filippi, Monika Frenzel, Dimka Georgieva, Eric Gregoire, Kamile Guogyte, Valeria Hadjidekova, Ljubomira Hadjiiska, Rositsa Hristova, Maria Karakosta, Enikő Kis, Ralf Kriehuber, Jungil Lee, David Lloyd, Katalin Lumniczky, Fiona Lyng, Ellina Macaeva, Matthaeus Majewski, S. Vanda Martins, Stephen W.S. McKeever, Aidan Meade, Dinesh Medipally, Roberta Meschini, Radhia M’kacher, Octávia Monteiro Gil, Alegria Montero, Mercedes Moreno, Mihaela Noditi, Ursula Oestreicher, Dominik Oskamp, Fabrizio Palitti, Valentina Palma, Gabriel Pan
International Journal of Radiation Biology 93(1) (2017) 99–109
doi:10.1080/09553002.2016.1206233
Towards long lasting zirconia-based composites for dental implants: Transformation induced plasticity and its consequence on ceramic reliability
Helen Reveron, Marta Fornabaio, Paola Palmero, Tobias Fürderer, Erik Adolfsson, Vanni Lughi, Alois Bonifacio, Valter Sergo, Laura Montanaro and Jérôme Chevalier
Acta Biomaterialia 48 (2017) 423–432
doi:10.1016/j.actbio.2016.11.040
Differentiating responses of lung cancer cell lines to Doxorubicin exposure: in vitro Raman micro spectroscopy, oxidative stress and bcl-2 protein expression
Zeineb Farhane, Franck Bonnier, Marcus Alexander Maher, Jane Bryant, Alan Casey and Hugh James Byrne
Journal of Biophotonics 10(1) (2017) 151–165
doi:10.1002/jbio.201600019
Mirrored stainless steel substrate provides improved signal for Raman spectroscopy of tissue and cells
Aaran T. Lewis, Riana Gaifulina, Martin Isabelle, Jennifer Dorney, Mae L. Woods, Gavin R. Lloyd, Katherine Lau, Manuel Rodriguez-Justo, Catherine Kendall, Nicholas Stone and Geraint M. Thomas
Journal of Raman Spectroscopy 48(1) (2017) 119–125
doi:10.1002/jrs.4980
Feature driven classification of Raman spectra for real-time spectral brain tumour diagnosis using sound
Ryan Stables, Graeme Clemens, Holly J. Butler, Katherine M. Ashton, Andrew Brodbelt, Timothy P. Dawson, Leanne M. Fullwood, Michael D. Jenkinson and Matthew J. Baker
The Analyst 142(1) (2017) 98–109
doi:10.1039/c6an01583b
FTIR imaging of the molecular burden around Aβ deposits in an early-stage 3-Tg-APP-PSP1-TAU mouse model of Alzheimer's disease
Artur Dawid Surowka, Michael Pilling, Alex Henderson, Herve Boutin, Lidan Christie, Magdalena Szczerbowska-Boruchowska and Peter Gardner
The Analyst 142(1) (2017) 156–168
doi:10.1039/c6an01797e
Infrared spectral histopathology using haematoxylin and eosin (H&E) stained glass slides: a major step forward towards clinical translation
Michael J. Pilling, Alex Henderson, Jonathan H. Shanks, Michael D. Brown, Noel W. Clarke and Peter Gardner
The Analyst (2017)
doi:10.1039/c6an02224c
Development of methodology for Raman microspectroscopic analysis of oral exfoliated cells
Isha Behl, Genecy Calado, Ola Ibrahim, Alison Malkin, Stephen Flint, Hugh J. Byrne and Fiona M. Lyng
Anal. Methods 9(6) (2017) 937–948
doi:10.1039/c6ay03360a
Automated prostate tissue referencing for cancer detection and diagnosis
Jin Tae Kwak, Stephen M. Hewitt, André Alexander Kajdacsy-Balla, Saurabh Sinha and Rohit Bhargava
BMC Bioinformatics 17(1) (2016)
doi:10.1186/s12859-016-1086-6
Spectroscopic studies of anthracyclines: Structural characterization and in vitro tracking
Ewelina Szafraniec, Katarzyna Majzner, Zeineb Farhane, Hugh J. Byrne, Malgorzata Lukawska, Irena Oszczapowicz, Stefan Chlopicki and Malgorzata Baranska
Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 169 (2016) 152–160
doi:10.1016/j.saa.2016.06.035
Role of mono- and oligosaccharides from FOS as stabilizing agents during freeze-drying and storage of Lactobacillus delbrueckii subsp. bulgaricus
Nelson Romano, Carolina Schebor, Pablo Mobili and Andrea Gómez-Zavaglia
Food Research International 90 (2016) 251–258
doi:10.1016/j.foodres.2016.11.003
ATR-FTIR spectroscopic imaging to study the drying and dissolution of pharmaceutical polymer-based films
Hiroki Hifumi, Andrew V. Ewing and Sergei G. Kazarian
International Journal of Pharmaceutics 515(1-2) (2016) 57–68
doi:10.1016/j.ijpharm.2016.09.085
Matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry (MS) for the identification of highly pathogenic bacteria
Peter Lasch, Daniela Jacob, Roland Grunow, Torsten Schwecke and Joerg Doellinger
TrAC Trends in Analytical Chemistry 85 (2016) 103–111
doi:10.1016/j.trac.2016.04.013
Microcantilever arrays functionalised with spiropyran photoactive moieties as systems to measure photo-induced surface stress changes
Catherine Grogan, Larisa Florea, Slavica Koprivica, Silvia Scarmagnani, Luke O’Neill, Fiona Lyng, Fran Pedreschi, Fernando Benito-Lopez and Roberto Raiteri
Sensors and Actuators B: Chemical 237 (2016) 479–486
doi:10.1016/j.snb.2016.06.108
Evidence of biogeochemical processes in iron duricrust formation
Alan Levett, Emma Gagen, Jeremiah Shuster, Llew Rintoul, Mark Tobin, Jitraporn Vongsvivut, Keith Bambery, Paulo Vasconcelos and Gordon Southam
Journal of South American Earth Sciences 71 (2016) 131–142
doi:10.1016/j.jsames.2016.06.016
Defined Host-Guest Chemistry on Nanocarbon for Sustained Inhibition of Cancer
Fatemeh Ostadhossein, Santosh K. Misra, Prabuddha Mukherjee, Alireza Ostadhossein, Enrique Daza, Saumya Tiwari, Shachi Mittal, Mark C. Gryka, Rohit Bhargava and Dipanjan Pan
Small 12(42) (2016) 5845–5861
doi:10.1002/smll.201601161
Screening the low molecular weight fraction of human serum using ATR-IR spectroscopy
Franck Bonnier, Guillaume Brachet, Romain Duong, Tobiloba Sojinrin, Renaud Respaud, Nicolas Aubrey, Matthew J. Baker, Hugh J. Byrne and Igor Chourpa
Journal of Biophotonics 9(10) (2016) 1085–1097
doi:10.1002/jbio.201600015
Potential of Surface Enhanced Raman Spectroscopy (SERS) in Therapeutic Drug Monitoring (TDM). A Critical Review
Aleksandra Jaworska, Stefano Fornasaro, Valter Sergo and Alois Bonifacio
Biosensors 6(3) (2016) 47
doi:10.3390/bios6030047
A review of novel analytical diagnostics for liquid biopsies: spectroscopic and spectrometric serum profiling of primary and secondary brain tumors
Katie Spalding, Ruth Board, Timothy Dawson, Michael D. Jenkinson and Matthew J. Baker
Brain and Behavior 6(9) (2016) e00502
doi:10.1002/brb3.502
Elemental and molecular profiling of licit, illicit, and niche tobacco
Kim Quayle, Graeme Clemens, Tamar Garcia Sorribes, Hannah M. Kinvig, Paul G. Stevenson, Xavier A. Conlan and Matthew J. Baker
Forensic Science International 266 (2016) 549–554
doi:10.1016/j.forsciint.2016.07.023
Measuring and Predicting the Internal Structure of Semiconductor Nanocrystals through Raman Spectroscopy
Prabuddha Mukherjee, Sung Jun Lim, Tomasz P. Wrobel, Rohit Bhargava and Andrew M. Smith
Journal of the American Chemical Society 138(34) (2016) 10887–10896
doi:10.1021/jacs.6b03907
Evaluation of cytotoxicity profile and intracellular localisation of doxorubicin-loaded chitosan nanoparticles
Gabriele Dadalt Souto, Zeineb Farhane, Alan Casey, Esen Efeoglu, Jennifer McIntyre and Hugh James Byrne
Analytical and Bioanalytical Chemistry 408(20) (2016) 5443–5455
doi:10.1007/s00216-016-9641-6
Towards the intra-operative use of Raman spectroscopy in breast cancer—overcoming the effects of theatre lighting
Jonathan D. Horsnell, Catherine Kendall and Nicholas Stone
Lasers in Medical Science 31(6) (2016) 1143–1149
doi:10.1007/s10103-016-1959-y
Emerging Themes in Image Informatics and Molecular Analysis for Digital Pathology
Rohit Bhargava and Anant Madabhushi
Annual Review of Biomedical Engineering 18(1) (2016) 387–412
doi:10.1146/annurev-bioeng-112415-114722
Modification of the in vitro uptake mechanism and antioxidant levels in HaCaT cells and resultant changes to toxicity and oxidative stress of G4 and G6 poly(amidoamine) dendrimer nanoparticles
Marcus A. Maher and Hugh J. Byrne
Analytical and Bioanalytical Chemistry 408(19) (2016) 5295–5307
doi:10.1007/s00216-016-9623-8
Effect of sucrose concentration on the composition of enzymatically synthesized short-chain fructo-oligosaccharides as determined by FTIR and multivariate analysis
Nelson Romano, Mauricio Santos, Pablo Mobili, Roberto Vega and Andrea Gómez-Zavaglia
Food Chemistry 202 (2016) 467–475
doi:10.1016/j.foodchem.2016.02.002
Clinical application of infrared fibre-optic probes for the discrimination of colorectal cancer tissues and cancer grades
Julian Ollesch, Michael Zaczek, H. Michael Heise, Oliver Theisen, Frederik Großerüschkamp, Ralf Schmidt, Konrad Morgenroth, Stathis Philippou, Matthias Kemen and Klaus Gerwert
Vibrational Spectroscopy (2016)
doi:10.1016/j.vibspec.2016.07.003
Chemico-mechanical imaging of Barrett's oesophagus
Francesca Palombo, Marco Madami, Daniele Fioretto, Jayakrupakar Nallala, Hugh Barr, Antoine David and Nick Stone
Journal of Biophotonics 9(7) (2016) 694–700
doi:10.1002/jbio.201600038
Comprehensive Vibrational Spectroscopic Investigation oftrans,trans,trans-[Pt(N3)2(OH)2(py)2], a Pt(IV) Diazido Anticancer Prodrug Candidate
Robbin R. Vernooij, Tanmaya Joshi, Evyenia Shaili, Manja Kubeil, Dominique R. T. Appadoo, Ekaterina I. Izgorodina, Bim Graham, Peter J. Sadler, Bayden R. Wood and Leone Spiccia
Inorganic Chemistry 55(12) (2016) 5983–5992
doi:10.1021/acs.inorgchem.6b00476
Characterisation of signal enhancements achieved when utilizing a photon diode in deep Raman spectroscopy of tissue
Martha Z. Vardaki, Pavel Matousek and Nicholas Stone
Biomedical Optics Express 7(6) (2016) 2130–2141
doi:10.1364/boe.7.002130
Quantitative microscopic evaluation of mucin areas and its percentage in mucinous carcinoma of the breast using tissue histological images
Monjoy Saha, Indu Arun, Bijan Basak, Sanjit Agarwal, Rosina Ahmed, Sanjoy Chatterjee, Rohit Bhargava and Chandan Chakraborty
Tissue and Cell 48(3) (2016) 265–273
doi:10.1016/j.tice.2016.02.005
Chemotherapeutic efficiency of drugs in vitro: Comparison of doxorubicin exposure in 3D and 2D culture matrices
A. Casey, M. Gargotti, F. Bonnier and H.J. Byrne
Toxicology in Vitro 33 (2016) 99–104
doi:10.1016/j.tiv.2016.02.022
Evaluation of biomolecular distributions in rat brain tissues by means of ToF-SIMS using a continuous beam of Ar clusters
Shusuke Nakano, Yuta Yokoyama, Satoka Aoyagi, Naoyuki Himi, John S. Fletcher, Nicholas P. Lockyer, Alex Henderson and John C. Vickerman
Biointerphases 11(2) (2016) 02A307
doi:10.1116/1.4939251
Brain tumour differentiation: rapid stratified serum diagnostics via attenuated total reflection Fourier-transform infrared spectroscopy
James R. Hands, Graeme Clemens, Ryan Stables, Katherine Ashton, Andrew Brodbelt, Charles Davis, Timothy P. Dawson, Michael D. Jenkinson, Robert W. Lea, Carol Walker and Matthew J. Baker
Journal of Neuro-Oncology 127(3) (2016) 463–472
doi:10.1007/s11060-016-2060-x
Evaluation of metabolomics profiles of grain from maize hybrids derived from near-isogenic GM positive and negative segregant inbreds demonstrates that observed differences cannot be attributed unequivocally to the GM trait
George G. Harrigan, Tyamagondlu V. Venkatesh, Mark Leibman, Jonathan Blankenship, Timothy Perez, Steven Halls, Alexander W. Chassy, Oliver Fiehn, Yun Xu and Royston Goodacre
Metabolomics 12(5) (2016)
doi:10.1007/s11306-016-1017-6
Infrared emission spectroscopy of atmospheric-pressure ball plasmoids
Scott E. Dubowsky, Bradley Deutsch, Rohit Bhargava and Benjamin J. McCall
Journal of Molecular Spectroscopy 322 (2016) 1–8
doi:10.1016/j.jms.2016.02.005
Spectral pre and post processing for infrared and Raman spectroscopy of biological tissues and cells
Hugh J. Byrne, Peter Knief, Mark E. Keating and Franck Bonnier
Chem. Soc. Rev. 45(7) (2016) 1865–1878
doi:10.1039/c5cs00440c
Recent advances in optical diagnosis of oral cancers: Review and future perspectives
S.P. Singh, Ola Ibrahim, Hugh J. Byrne, Jopi W. Mikkonen, Arto P. Koistinen, Arja M. Kullaa and Fiona M. Lyng
Head & Neck 38(S1) (2016) E2403–E2411
doi:10.1002/hed.24293
Diagnosis of cancer multidrug resistance by bacterium-mediated imaging
Omar Anwar Elkadi and Muhammad Abdelbasset
Medical Hypotheses 89 (2016) 11–15
doi:10.1016/j.mehy.2016.01.016
Characterization of decavanadate and decaniobate solutions by Raman spectroscopy
Manuel Aureliano, C. André Ohlin, Michele O. Vieira, M. Paula M. Marques, William H. Casey and Luís A. E. Batista de Carvalho
Dalton Trans. 45(17) (2016) 7391–7399
doi:10.1039/c5dt04176g
Growth-related Metabolism of the Carbon Storage Poly-3-hydroxybutyrate inLegionella pneumophila
Nadine Gillmaier, Eva Schunder, Erika Kutzner, Hana Tlapák, Kerstin Rydzewski, Vroni Herrmann, Maren Stämmler, Peter Lasch, Wolfgang Eisenreich and Klaus Heuner
Journal of Biological Chemistry 291(12) (2016) 6471–6482
doi:10.1074/jbc.m115.693481
Structural dependence ofin vitrocytotoxicity, oxidative stress and uptake mechanisms of poly(propylene imine) dendritic nanoparticles
Humza Khalid, Sourav Prasanna Mukherjee, Luke O'Neill and Hugh J. Byrne
Journal of Applied Toxicology 36(3) (2016) 464–473
doi:10.1002/jat.3267
Bone Samples Extracted from Embalmed Subjects Are Not Appropriate for the Assessment of Bone Quality at the Molecular Level Using Raman Spectroscopy
Tristan Pascart, Bernard Cortet, Cecile Olejnik, Julien Paccou, Henri Migaud, Anne Cotten, Yann Delannoy, Alexandrine During, Pierre Hardouin, Guillaume Penel and Guillaume Falgayrac
Analytical Chemistry 88(5) (2016) 2777–2783
doi:10.1021/acs.analchem.5b04400
Say hello to Dr Warwick Dunn! Metabolomics’ new Reviews Editor
Royston Goodacre
Metabolomics 12(3) (2016) 1–2
doi:10.1007/s11306-016-0978-9
Attenuated total reflection-Fourier transform infrared spectroscopic imaging of pharmaceuticals in microfluidic devices
Andrew V. Ewing, Graham S. Clarke and Sergei G. Kazarian
Biomicrofluidics 10(2) (2016) 024125
doi:10.1063/1.4946867
Conformational study and reassessment of the vibrational assignments for Norspermidine
T.M. Silva, S.M. Fiuza, M.P.M. Marques, L.A.E. Batista de Carvalho and A.M. Amado
Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy 157 (2016) 227–237
doi:10.1016/j.saa.2016.01.003
Detection of Protein Glycosylation Using Tip-Enhanced Raman Scattering
David P. Cowcher, Tanja Deckert-Gaudig, Victoria L. Brewster, Lorna Ashton, Volker Deckert and Royston Goodacre
Analytical Chemistry 88(4) (2016) 2105–2112
doi:10.1021/acs.analchem.5b03535
Temperature Spatially Offset Raman Spectroscopy (T-SORS): Subsurface Chemically Specific Measurement of Temperature in Turbid Media Using Anti-Stokes Spatially Offset Raman Spectroscopy
Benjamin Gardner, Pavel Matousek and Nicholas Stone
Analytical Chemistry 88(1) (2016) 832–837
doi:10.1021/acs.analchem.5b03360
Acellular reactivity of polymeric dendrimer nanoparticles as an indicator of oxidative stress in vitro
Marcus A. Maher, Humza Khalid and Hugh J. Byrne
Analytical and Bioanalytical Chemistry 408(3) (2016) 695–703
doi:10.1007/s00216-015-9171-7
Achieving optimal SERS through enhanced experimental design
Heidi Fisk, Chloe Westley, Nicholas J. Turner and Royston Goodacre
Journal of Raman Spectroscopy 47(1) (2016) 59–66
doi:10.1002/jrs.4855
Continued growth, continual progress, and continuous publications
Royston Goodacre
Metabolomics 12(1) (2016) 1–2
doi:10.1007/s11306-015-0911-7
Data standards can boost metabolomics research, and if there is a will, there is a way
Philippe Rocca-Serra, Reza M. Salek, Masanori Arita, Elon Correa, Saravanan Dayalan, Alejandra Gonzalez-Beltran, Tim Ebbels, Royston Goodacre, Janna Hastings, Kenneth Haug, Albert Koulman, Macha Nikolski, Matej Oresic, Susanna-Assunta Sansone, Daniel Schober, James Smith, Christoph Steinbeck, Mark R. Viant and Steffen Neumann
Metabolomics 12(1) (2016) 1–13
doi:10.1007/s11306-015-0879-3
High-throughput metabolic screening of microalgae genetic variation in response to nutrient limitation
Amit K. Bajhaiya, Andrew P. Dean, Thomas Driver, Drupad K. Trivedi, Nicholas J. W. Rattray, J. William Allwood, Royston Goodacre and Jon K. Pittman
Metabolomics 12(1) (2016) 1–14
doi:10.1007/s11306-015-0878-4
Biofluid infrared spectro-diagnostics: pre-analytical considerations for clinical applications
L. Lovergne, P. Bouzy, V. Untereiner, R. Garnotel, M. J. Baker, G. Thiéfin and G. D. Sockalingum
Faraday Discuss. 187 (2016) 521–537
doi:10.1039/c5fd00184f
Biofluids and other techniques: general discussion
Royston Goodacre, Matthew J. Baker, Duncan Graham, Zachary D. Schultz, Max Diem, Maria Paula Marques, Gianfelice Cinque, Robbin Vernooij, Josep Sulé-Suso, Hugh J. Byrne, Karen Faulds, Michael Hermes, Holly Fleming, Alois Bonifacio, Richard Dluhy, Peter Gardner, Samir El-Mashtoly, Bayden Wood, Kathleen Gough, Stefano Fornasaro, Sergei Kazarian, Lauren Jamieson, Wolfgang Petrich, Ganesh Dhruvananda Sockalingum, Nick Stone, Catherine Kendall, Faris Sinjab, Parvez Haris, Abdu Subaihi, Stan Remiszewski, Petra Hellwig, Valter Sergo, Klaus Gerwert, Christopher Phillips and Colin J. Campbell
Faraday Discuss. 187 (2016) 575–601
doi:10.1039/c6fd90014c
Can mid-infrared biomedical spectroscopy of cells, fluids and tissue aid improvements in cancer survival? A patient paradigm
Caryn Hughes and Matthew J. Baker
The Analyst 141(2) (2016) 467–475
doi:10.1039/c5an01858g
Clinical Spectroscopy: general discussion
Royston Goodacre, Valter Sergo, Hugh Barr, Christopher Sammon, Zachary D. Schultz, Matthew J. Baker, Duncan Graham, Maria Paula Marques, Josep Sulé-Suso, James Livermore, Karen Faulds, Faris Sinjab, Pavel Matousek, Colin J. Campbell, Richard Dluhy, Peter Gardner, Christopher Phillips, Max Diem, Bayden Wood, Alexander Apolonskiy, Sergei Kazarian, Leanne Fullwood, Kathleen Gough, Wolfgang Petrich, Gavin Lloyd, Ola Ibrahim, Gianfelice Cinque, Ganesh Dhruvananda Sockalingum, Nick Stone, Catherine Kendall, Sarah McAughtrie, David Perez-Guaita, Louise Clark, Klaus Gerwert, Alois Bonifacio, Ioan Notingher, Peter Lasch, Rohit Bhargava, Guillaume Lepert, Kerstin Mader and Carl Paterson
Faraday Discuss. 187 (2016) 429–460
doi:10.1039/c6fd90013e
Combining random forest and 2D correlation analysis to identify serum spectral signatures for neuro-oncology
Benjamin R. Smith, Katherine M. Ashton, Andrew Brodbelt, Timothy Dawson, Michael D. Jenkinson, Neil T. Hunt, David S. Palmer and Matthew J. Baker
The Analyst 141(12) (2016) 3668–3678
doi:10.1039/c5an02452h
Developing and understanding biofluid vibrational spectroscopy: a critical review
Matthew J. Baker, Shawn R. Hussain, Lila Lovergne, Valérie Untereiner, Caryn Hughes, Roman A. Lukaszewski, Gérard Thiéfin and Ganesh D. Sockalingum
Chem. Soc. Rev. 45(7) (2016) 1803–1818
doi:10.1039/c5cs00585j
Fundamental developments in clinical infrared and Raman spectroscopy
Matthew J. Baker and Karen Faulds
Chem. Soc. Rev. 45(7) (2016) 1792–1793
doi:10.1039/c6cs90028c
Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening
Caryn Hughes, Graeme Clemens, Benjamin Bird, Timothy Dawson, Katherine M. Ashton, Michael D. Jenkinson, Andrew Brodbelt, Miles Weida, Edeline Fotheringham, Matthew Barre, Jeremy Rowlette and Matthew J. Baker
Scientific Reports 6 (2016) 20173
doi:10.1038/srep20173
Single cell analysis/data handling: general discussion
Matthew J. Baker, Royston Goodacre, Christopher Sammon, Maria Paula Marques, Peter Gardner, William Tipping, Josep Sulé-Suso, Bayden Wood, Hugh J. Byrne, Michael Hermes, Pavel Matousek, Colin J. Campbell, Samir El-Mashtoly, Jonathan Frost, Christopher Phillips, Max Diem, Achim Kohler, Katherine Lau, Sergei Kazarian, Wolfgang Petrich, Gavin Lloyd, Ines Delfino, Gianfelice Cinque, Martin Isabelle, Nick Stone, Catherine Kendall, Lauren Jamieson, David Perez-Guaita, Louise Clark, Klaus Gerwert, Ioan Notingher, Luca Quaroni, Rohit Bhargava, Aidan Meade and Fiona Lyng
Faraday Discuss. 187 (2016) 299–327
doi:10.1039/c6fd90012g
Spectral Pathology: general discussion
Christopher Sammon, Zachary D. Schultz, Sergei Kazarian, Hugh Barr, Royston Goodacre, Duncan Graham, Matthew J. Baker, Peter Gardner, Bayden Wood, Colin J. Campbell, Richard Dluhy, Samir El-Mashtoly, Christopher Phillips, Jonathan Frost, Max Diem, Achim Kohler, Parvez Haris, Alexander Apolonskiy, Hemmel Amrania, Peter Lasch, Zhe Zhang, Wolfgang Petrich, Ganesh Dhruvananda Sockalingum, Nick Stone, Klaus Gerwert, Ioan Notingher, Rohit Bhargava, Niels Kröger-Lui, Martin Isabelle and Michael Pilling
Faraday Discuss. 187 (2016) 155–186
doi:10.1039/c6fd90011a
Development of a practical spatial-spectral analysis protocol for breast histopathology using Fourier transform infrared spectroscopic imaging
F. Nell Pounder, Rohith K. Reddy and Rohit Bhargava
Faraday Discuss. 187 (2016) 43–68
doi:10.1039/c5fd00199d
Multi-functionality Redefined with Colloidal Carotene Carbon Nanoparticles for Synchronized Chemical Imaging, Enriched Cellular Uptake and Therapy
Santosh K. Misra, Prabuddha Mukherjee, Huei-Huei Chang, Saumya Tiwari, Mark Gryka, Rohit Bhargava and Dipanjan Pan
Scientific Reports 6 (2016) 29299
doi:10.1038/srep29299
Vibrational spectroscopy and imaging for concurrent cellular trafficking of co-localized doxorubicin and deuterated phospholipid vesicles
S. K. Misra, P. Mukherjee, A. Ohoka, A. S. Schwartz-Duval, S. Tiwari, R. Bhargava and D. Pan
Nanoscale 8(5) (2016) 2826–2831
doi:10.1039/c5nr07975f
Toward SERS-based point-of-care approaches for therapeutic drug monitoring: the case of methotrexate
Stefano Fornasaro, Silvia Dalla Marta, Marco Rabusin, Alois Bonifacio and Valter Sergo
Faraday Discuss. 187 (2016) 485–499
doi:10.1039/c5fd00173k
A comparison of catabolic pathways induced in primary macrophages by pristine single walled carbon nanotubes and pristine graphene
Jennifer McIntyre, Navin K. Verma, Ronan J. Smith, Caroline Moore, Hannah Nerl, Niall McEvoy, Nina Berner, Ignatius McGovern, Umar Khan, Philip Lyons, Luke O'Neill, Valeria Nicolosi, Georg S. Duesberg, Hugh J. Byrne, Jonathan Coleman and Yuri Volkov
RSC Adv. 6(70) (2016) 65299–65310
doi:10.1039/c6ra02476a
In vitro monitoring of time and dose dependent cytotoxicity of aminated nanoparticles using Raman spectroscopy
Esen Efeoglu, Alan Casey and Hugh J. Byrne
The Analyst 141(18) (2016) 5417–5431
doi:10.1039/c6an01199c
Raman spectroscopy for cytopathology of exfoliated cervical cells
I. R. Ramos, A. D. Meade, O. Ibrahim, H. J. Byrne, M. McMenamin, M. McKenna, A. Malkin and F. M. Lyng
Faraday Discuss. 187 (2016) 187–198
doi:10.1039/c5fd00197h
Vibrational spectroscopy in sensing radiobiological effects: analyses of targeted and non-targeted effects in human keratinocytes
Aidan D. Meade, Orla Howe, Valérie Unterreiner, Ganesh D. Sockalingum, Hugh J. Byrne and Fiona M. Lyng
Faraday Discuss. 187 (2016) 213–234
doi:10.1039/c5fd00208g
Determination of cyanidin 3-glucoside in rat brain, liver and kidneys by UPLC/MS-MS and its application to a short-term pharmacokinetic study
Stefano Fornasaro, Lovro Ziberna, Mattia Gasperotti, Federica Tramer, Urška Vrhovšek, Fulvio Mattivi and Sabina Passamonti
Scientific Reports 6 (2016) 22815
doi:10.1038/srep22815
Effect of Galacto-Oligosaccharides: Maltodextrin Matrices on the Recovery of Lactobacillus plantarum after Spray-Drying
Natalia Sosa, Esteban Gerbino, Marina A. Golowczyc, Carolina Schebor, Andrea Gómez-Zavaglia and E. Elizabeth Tymczyszyn
Frontiers in Microbiology 7(MAY) (2016)
doi:10.3389/fmicb.2016.00584
Biochemical Analyses of Sorghum Varieties Reveal Differential Responses to Drought
Chukwuma C. Ogbaga, Piotr Stepien, Beth C. Dyson, Nicholas J. W. Rattray, David I. Ellis, Royston Goodacre and Giles N. Johnson
PLOS ONE 11(5) (2016) e0154423
doi:10.1371/journal.pone.0154423
Chicken, beams, and Campylobacter: rapid differentiation of foodborne bacteria via vibrational spectroscopy and MALDI-mass spectrometry
Howbeer Muhamadali, Danielle Weaver, Abdu Subaihi, Najla AlMasoud, Drupad K. Trivedi, David I. Ellis, Dennis Linton and Royston Goodacre
The Analyst 141(1) (2016) 111–122
doi:10.1039/c5an01945a
Meat, the metabolites: an integrated metabolite profiling and lipidomics approach for the detection of the adulteration of beef with pork
Drupad K. Trivedi, Katherine A. Hollywood, Nicholas J. W. Rattray, Holli Ward, Dakshat K. Trivedi, Joseph Greenwood, David I. Ellis and Royston Goodacre
The Analyst 141(7) (2016) 2155–2164
doi:10.1039/c6an00108d
Metabolomics reveals the physiological response of Pseudomonas putida KT2440 (UWC1) after pharmaceutical exposure
Felicity Currie, David I. Broadhurst, Warwick B. Dunn, Christopher A. Sellick and Royston Goodacre
Mol. BioSyst. 12(4) (2016) 1367–1377
doi:10.1039/c5mb00889a
Towards Improving Point-of-Care Diagnosis of Non-malaria Febrile Illness: A Metabolomics Approach
Saskia Decuypere, Jessica Maltha, Stijn Deborggraeve, Nicholas J. W. Rattray, Guiraud Issa, Kaboré Bérenger, Palpouguini Lompo, Marc C. Tahita, Thusitha Ruspasinghe, Malcolm McConville, Royston Goodacre, Halidou Tinto, Jan Jacobs and Jonathan R. Carapetis
PLOS Neglected Tropical Diseases 10(3) (2016) e0004480
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Label-free classification of colon cancer grading using infrared spectral histopathology
C. Kuepper, F. Großerueschkamp, A. Kallenbach-Thieltges, A. Mosig, A. Tannapfel and K. Gerwert
Faraday Discuss. 187 (2016) 105–118
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High-throughput quantum cascade laser (QCL) spectral histopathology: a practical approach towards clinical translation
Michael J. Pilling, Alex Henderson, Benjamin Bird, Mick D. Brown, Noel W. Clarke and Peter Gardner
Faraday Discuss. 187 (2016) 135–154
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Near-field Raman dichroism of azo-polymers exposed to nanoscale dc electrical and optical poling
Sergey S. Kharintsev, Alexandr I. Fishman, Semion K. Saikin and Sergei G. Kazarian
Nanoscale 8(47) (2016) 19867–19875
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Classification of fracture and non-fracture groups by analysis of coherent X-ray scatter
A. J. Dicken, J. P. O. Evans, K. D. Rogers, N. Stone, C. Greenwood, S. X. Godber, J. G. Clement, I. D. Lyburn, R. M. Martin and P. Zioupos
Scientific Reports 6 (2016) 29011
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Developing fibre optic Raman probes for applications in clinical spectroscopy
Oliver Stevens, Ingeborg E. Iping Petterson, John C. C. Day and Nick Stone
Chem. Soc. Rev. 45(7) (2016) 1919–1934
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Development of deep subsurface Raman spectroscopy for medical diagnosis and disease monitoring
Pavel Matousek and Nicholas Stone
Chem. Soc. Rev. 45(7) (2016) 1794–1802
doi:10.1039/c5cs00466g
High-resolution FTIR imaging of colon tissues for elucidation of individual cellular and histopathological features
Jayakrupakar Nallala, Gavin Rhys Lloyd, Neil Shepherd and Nick Stone
The Analyst 141(2) (2016) 630–639
doi:10.1039/c5an01871d
Multi-centre Raman spectral mapping of oesophageal cancer tissues: a study to assess system transferability
M. Isabelle, J. Dorney, A. Lewis, G. R. Lloyd, O. Old, N. Shepherd, M. Rodriguez-Justo, H. Barr, K. Lau, I. Bell, S. Ohrel, G. Thomas, N. Stone and C. Kendall
Faraday Discuss. 187 (2016) 87–103
doi:10.1039/c5fd00183h
Non-invasive chemically specific measurement of subsurface temperature in biological tissues using surface-enhanced spatially offset Raman spectroscopy
Benjamin Gardner, Nicholas Stone and Pavel Matousek
Faraday Discuss. 187 (2016) 329–339
doi:10.1039/c5fd00154d
Using Raman spectroscopy to characterize biological materials
Holly J Butler, Lorna Ashton, Benjamin Bird, Gianfelice Cinque, Kelly Curtis, Jennifer Dorney, Karen Esmonde-White, Nigel J Fullwood, Benjamin Gardner, Pierre L Martin-Hirsch, Michael J Walsh, Martin R McAinsh, Nicholas Stone and Francis L Martin
Nature Protocols 11(4) (2016) 664–687
doi:10.1038/nprot.2016.036
Twittering About Research: A Case Study of the World’s First Twitter Poster Competition
Edward P. Randviir, Samuel M. Ilingworth, Matthew J. Baker, Matthew Cude and Craig E. Banks
F1000Research (2015)
doi:10.12688/f1000research.6992.2
Effect of protective agents and previous acclimation on ethanol resistance of frozen and freeze-dried Lactobacillus plantarum strains
Bárbara Mercedes Bravo-Ferrada, Natalia Brizuela, Esteban Gerbino, Andrea Gómez-Zavaglia, Liliana Semorile and E. Elizabeth Tymczyszyn
Cryobiology 71(3) (2015) 522–528
doi:10.1016/j.cryobiol.2015.10.154
Role of S-layer proteins in bacteria
E. Gerbino, P. Carasi, P. Mobili, M. A. Serradell and A. Gómez-Zavaglia
World Journal of Microbiology and Biotechnology 31(12) (2015) 1877–1887
doi:10.1007/s11274-015-1952-9
COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access
Reza M. Salek, Steffen Neumann, Daniel Schober, Jan Hummel, Kenny Billiau, Joachim Kopka, Elon Correa, Theo Reijmers, Antonio Rosato, Leonardo Tenori, Paola Turano, Silvia Marin, Catherine Deborde, Daniel Jacob, Dominique Rolin, Benjamin Dartigues, Pablo Conesa, Kenneth Haug, Philippe Rocca-Serra, Steve O’Hagan, Jie Hao, Michael van Vliet, Marko Sysi-Aho, Christian Ludwig, Jildau Bouwman, Marta Cascante, Timothy Ebbels, Julian L. Griffin, Annick Moing, Macha Nikolski, Matej Oresic, Susanna-Assunta Sansone, Mark R. Viant, Royston Goodacre, Ulrich L. Günther, Thomas Hankemeier, Claudio Luchinat, Dirk Walther and Christoph Steinbeck
Metabolomics 11(6) (2015) 1587–1597
doi:10.1007/s11306-015-0810-y
Erratum to: COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access
Reza M. Salek, Steffen Neumann, Daniel Schober, Jan Hummel, Kenny Billiau, Joachim Kopka, Elon Correa, Theo Reijmers, Antonio Rosato, Leonardo Tenori, Paola Turano, Silvia Marin, Catherine Deborde, Daniel Jacob, Dominique Rolin, Benjamin Dartigues, Pablo Conesa, Kenneth Haug, Philippe Rocca-Serra, Steve O’Hagan, Jie Hao, Michael van Vliet, Marko Sysi-Aho, Christian Ludwig, Jildau Bouwman, Marta Cascante, Timothy Ebbels, Julian L. Griffin, Annick Moing, Macha Nikolski, Matej Oresic, Susanna-Assunta Sansone, Mark R. Viant, Royston Goodacre, Ulrich L. Günther, Thomas Hankemeier, Claudio Luchinat, Dirk Walther and Christoph Steinbeck
Metabolomics 11(6) (2015) 1598–1599
doi:10.1007/s11306-015-0822-7
Metabolomics investigation of recombinant mTNFα production in Streptomyces lividans
Howbeer Muhamadali, Yun Xu, David I. Ellis, Drupad K. Trivedi, Nicholas J. W. Rattray, Kristel Bernaerts and Royston Goodacre
Microbial Cell Factories 14(1) (2015)
doi:10.1186/s12934-015-0350-1
Fully automated registration of vibrational microspectroscopic images in histologically stained tissue sections
Chen Yang, Daniel Niedieker, Frederik Großerüschkamp, Melanie Horn, Andrea Tannapfel, Angela Kallenbach-Thieltges, Klaus Gerwert and Axel Mosig
BMC Bioinformatics 16(1) (2015)
doi:10.1186/s12859-015-0804-9
Applications of Raman micro-spectroscopy to stem cell technology: label-free molecular discrimination and monitoring cell differentiation
Adrian Ghita, Flavius C Pascut, Virginie Sottile, Chris Denning and Ioan Notingher
EPJ Techniques and Instrumentation 2(1) (2015)
doi:10.1140/epjti/s40485-015-0016-8
The micro-architecture of human cancellous bone from fracture neck of femur patients in relation to the structural integrity and fracture toughness of the tissue
C. Greenwood, J.G. Clement, A.J. Dicken, J.P.O. Evans, I.D. Lyburn, R.M. Martin, K.D. Rogers, N. Stone, G. Adams and P. Zioupos
Bone Reports 3 (2015) 67–75
doi:10.1016/j.bonr.2015.10.001
Label-free surface-enhanced Raman spectroscopy of biofluids: fundamental aspects and diagnostic applications
Alois Bonifacio, Silvia Cervo and Valter Sergo
Analytical and Bioanalytical Chemistry 407(27) (2015) 8265–8277
doi:10.1007/s00216-015-8697-z
Raman spectroscopy for screening and diagnosis of cervical cancer
Fiona M. Lyng, Damien Traynor, Inês R. M. Ramos, Franck Bonnier and Hugh J. Byrne
Analytical and Bioanalytical Chemistry 407(27) (2015) 8279–8289
doi:10.1007/s00216-015-8946-1